Secondly, I've extended upon work from a previous post where I evaluated the accuracy of several DNA-seq mappers with error containing reads, and did further work like:
- varying the read length from 50 nt to 480 nt
- performing parallel analysis with Arabidopsis and human
- using simulators to generate Illumina and Ion Torrent read sets
- tested the speed (throughput) of aligners with Illumina reads
This work was just made public today on bioaRxiv. Have a read and tell me what you think! Here's the Link.